Difference between revisions of "Main Page"

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(Xradia Instructions)
(Developer)
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====[[Software Plugins and Codes]]====
 
====[[Software Plugins and Codes]]====
 
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* [[Software_Plugins_and_Codes#ImageJ_Plugin_for_AIM_ISQ_RSQ_files| ImageJ Plugin for AIM ISQ RSQ files]]
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[[Software_Plugins_and_Codes#ImageJ| '''ImageJ''']]
* [[Software_Plugins_and_Codes#Amira_Script_for_AIM_files| Amira Script for AIM files]]
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*[[Software_Plugins_and_Codes#Plugin_to_read_AIM_ISQ_RSQ_files| Plugin to read AIM ISQ RSQ files]]
*[[Bone lab libraries]] A library of reusable bits for the kinds of things we do in the lab.  Built on VTK and ITK and other toolkits.
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*[[Software_Plugins_and_Codes#Generate_TIFF_from_AIM| Generate TIFF from AIM]]
*[[Bone lab applications]] provides a list of lab custom software.
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*[[SAP development]]
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[[Software_Plugins_and_Codes#Amira| '''Amira''']]
: SAP is a tool for visualizing and manipulating AIMs.
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*[[Software_Plugins_and_Codes#Script_to_read_AIM_files| Script to read AIM files]]
*[[IGFA control]]
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: Image guided failure assessment device (aka the cannon) can be controlled from PC via serial port.
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[[Software_Plugins_and_Codes#R|'''R''']]  
*[[JAGS Statistics]]
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*[[Software_Plugins_and_Codes#JAGS_Statistics| JAGS Statistics]]
: Analysis of Bayesian models using Markov Chain Monte Carlo
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*[[ParaView]]
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[[Software_Plugins_and_Codes#ParaView| '''ParaView''']]  
*[[Subversion (SVN)]] for accessing the source code of lab software.
 
  
 
====Platforms====
 
====Platforms====

Revision as of 16:20, 20 January 2021


Bone Imaging Laboratory Wiki


Wiki Concept

The idea of the 'Wiki' site is that any authorized user, in this case a member of the lab, can see and edit any of the pages on this site, as well as create new pages as required. Also, there is a document section where useful documents can uploaded or downloaded by anyone in the group.

The purpose of this is to facilitate information exchange within the lab and keep up-to-date How To and User Manuals for all lab procedures.

Smaller bone loss.jpg

Contents

Scanco User Instructions


OpenVMS Basics

Micro-CT Basics

Scanning

Evaluation

Results

Data Management

Import and Export

Remote Access

Books and References


Imaging

Bone



Scanco Administration


OpenVMS

Calibration and QC

Scanning

Evaluation

Results

Data Management

Process, Printer and System

Remote Access

Dose


Xradia Instructions


Image Registration


Scanco Image Registration

SimilarityRegistration

skiRegistration

Finite Element Modelling


Developer


Software Plugins and Codes


ImageJ

Amira

R

ParaView

Platforms


Obtaining, compiling and installing software development tools on various systems.

Languages and Toolkits


Miscellaneous


This section covers generic computer-related topics not covered in other sections.



A link back to: Steve Boyd's homepage

To return to the Lab home page: Biomedical Imaging Metrics Homepage