Editing Scanco Administration (section)

====Start 3D evaluation from terminal for XtremeCT II====

Logged into the terminal as "xtremect2" you can see the evaluation scripts in <code>IDISK1:[XTREMECT2.EVAL]</code>

The morphological evaluation: Control file #25. It basically runs auto contouring (#23) and then the morphological analysis.
* <code>UCT_EVALUATION_V6_XT2_DT61.COM</code>
* <code>IPLV6_EVAL_CORT.COM</code>
* <code>IPLV6_EVAL_TRAB.COM</code>
* <code>IPLV6_EVAL_TOTAL.COM</code>


* <code>UCT_3D_LIST_CORT_XT2.TXT</code>
* <code>UCT_3D_LIST_TRAB_XT2.TXT</code>
* <code>UCT_3D_LIST_TOTAL_XT2.TXT</code>

Contouring scripts:
* <code>IPLV6_AUTOK.COM</code>: Creates automatically the standard GOBJ. Control file #22.
* <code>IPL_AUTOK_CTTB.COM</code>: Creates automatically the CORT, TRAB and PORE.GOBJ (previously CRTXPO). Control file #23.
* <code>IPLV6_AUTOK_CTTB_CORR.COM</code>: Creates automatically the CORT and PORE.GOBJ, after manual correction on the TRAB.GOBJ. Control file #24.

Laplace- Hamming scripts:
* <code>IPLV6_UPAT_EVAL_LH61_XT1DB.COM</code>
* <code>IPLV6_UPAT_EVAL_LH82_XT1DB.COM</code>

Results will be generated in the <code>IDISK2:[XTREMECT2.RESULTS]</code> directory, in the same way as they are generated for the cortical analysis on XtremeCT I, i.e. using the uct database and appended text files.

Laplace Hamming evaluations will generate results in the upat_list database. The direct measurements will be stored in the uct_list database.


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