Eric To Do: Difference between revisions

From bone.wiki
Jump to navigation Jump to search
← Older edit

Enodwell (talk | contribs)

2 user groups
2,111 edits
undo
No edit summary
No edit summary
 
(56 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Soon==
==Soon==


faim: transverse constraints for standard tests.
* Contact Peter Cripton (talk to Steve first)
 
* Check progress of backup.
faim: license file
* Agreement to sell FAIM.
 
* Timesheets - back dated.
faim: functional tests (starting with single voxel, then using 2x2x2 voxels - particularly relevant for mt solver).
* spreadsheet for licenses
 
* Wiki page for customer information
faim: exact solver for comparison with functional tests?  Actually, don't even need exactly that.  Instead can do forward calculation with result.
* Numerics88 wiki - support for source tag.
 
* extra drives for SmartStor?
faim: cmake installation to destination
* Open directory for logging into lab computers.
 
* Numerics88 subversion repository - line endings automatically match client system.
faim: compare speed of new build to old build.
 
Backup drive.
 
vtkski.py getting created?
 
Gaussian Filter in ParaView is working?  not really - maybe in 3.8.1?
 
Test network speed between mighty-mac and mike .
 
AIMSimilarityRegistration.cxx : working?
 
AppPointPicker (name??) works on OS-X?
 
Make a 2x2x2 test data set (image + mesh).
vtkski: test installation.
 
vtkTensorOfInertia:
# get principle axes
# accept weights (as pointer) - or use scalars as default??
# test cases
# treat voxels as boxes instead of points
# accept UnstructuredGrid input (someday)
 
Carolyn : list of programs.
 
Add section to wiki about:
1. Basic CMake usage
2. common development directories (/usr. /opt, etc...)
 
ParaView Branding??
 
Try build of vtkski/ParaView with spaces in directory names.
 
ParaView build with vtkski included, Windows.
 
Binary build of vtkski?  (Including all Applications.)
 
Westgrid account.
 
Make OrientationParameters a class (in vtkMeshGenerator).
 
Find out why vtkImagePurify appears to do nothing.
 
Find out why vtkFairSmooth appears to do nothing.
 
Sort Applications into Categories.
 
Take Scoliosis thesis to Ivan.
 
Migrate high priority vtkMy apps with ITK.
 
Migrate high priority vtkMy apps with Qt.


==Medium Term==
==Medium Term==


Functional tests:
* Bonelab Wiki: Add list of applications for bonelab tools.
Implement sparse matrix version.  See http://www.scipy.org/Additional_Documentation/New_SciPy_Tutorial?action=show&redirect=SciPy+Tutorial#head-c60163f2fd2bab79edd94be43682414f18b90df7
* AIX and AIMOD into vtkski.
 
* Gaussian Filter in ParaView is working?  not really - maybe in 3.8.1?
Faim memory:
* Migrate high priority vtkMy apps with ITK.
* reporting
* Migrate high priority vtkMy apps with Qt.
* limiting (e.g. faim -memlimit 4GB somemodel.inp)
* itk Reader/Writer for AIM (and remove VTK dependencies for apps that use only this VTK item).
* estimating (e.g. faim -estimate somemodel.inp)
* Revision number in main page of vtkski doxygen documentation.
 
vtkskiMeshModel : no longer separately encode Restraints and Displacements (Restraints are just 0-valued Displacements).
 
Analytic expression for orthotropic element stiffness matrix elements.
 
Work out boundary values that arise from integration by parts in analytic expression for element stiffness matrix elements.
 
Get test data for aimpack_test?
 
MeshGenerator: split into
# Generic Mesh Generator (no boundary conditions)
# Standard Models Generator (probably a base class and subclasses)
 
Split faim FE solver and analysis into two separate programs.
 
Make sure that all Test programs can be run unmodified when moved out of the vtkski source tree.
 
DOxygen documentation for itkski
 
Fix up itkAIMImageIO.
 
itk Reader/Writer for AIM (and remove VTK dependencies for apps that use only this VTK item).
 
Submit conf_parser to boost??
 
Change all vtkski / Applications to use boost::program_options
 
Revision number in main page of vtkski doxygen documentation.
 
Evaluate possible speed gain of eliminating device syncs in faim/GPU.
 
Evaluate double-precision speed of faim on Westgrid hardware.
 
Make a vtkFAIMInputReader class.
 
Compile faim on WestGrid.
 
Move plane intersection functions out of vtkMeshGenerator into their own filter(s).
 
faim: accelerate post-processing
 
Rewrite faim in C++.
 
vtkski: cmake copy all headers to 'include' directory in build directory.


==Someday==
==Someday==


FAIM: km generation should be function (or even better, class) - should allow two flavors:
* mighty-mac and mavis: reconfigure disks into a single striped RAID array (hence users don't have to think about using /Volumes/localdata).
# S&G style numerical integration
* ParaView: Registration Plugins (a modification of one of http://paraview.org/Wiki/User_Created_Plugins ?)
# my analytic expression
* Speed tests for ifdutil and faim in general.
 
CPU affinity for multithreading in FAIM  (NUMA)
 
get cdash running.
 
MPI solver for faim
 
FAIM: partitioner based on 3D geometry (ie. noninductive sets based on 27 nearest neighbours + center).
 
Paraview: Create Mesh Model (including custom constraints) within ParaView
 
CMake: Install destination for vtkski, etc....
 
CMake: Binary Installer for vtkski, etc...
 
ParaView: Registraion Plugins (a modification of one of http://paraview.org/Wiki/User_Created_Plugins ?)
 
Speed tests for ifdutil and faim in general.


==Random Ideas==
==Random Ideas==
New file format for faim.  Either a more robust text format (with optional binary sections), or something like NetCDF/HDF5.

Latest revision as of 20:59, 12 May 2011

Soon

[edit]
  • Contact Peter Cripton (talk to Steve first)
  • Check progress of backup.
  • Agreement to sell FAIM.
  • Timesheets - back dated.
  • spreadsheet for licenses
  • Wiki page for customer information
  • Numerics88 wiki - support for source tag.
  • extra drives for SmartStor?
  • Open directory for logging into lab computers.
  • Numerics88 subversion repository - line endings automatically match client system.

Medium Term

[edit]
  • Bonelab Wiki: Add list of applications for bonelab tools.
  • AIX and AIMOD into vtkski.
  • Gaussian Filter in ParaView is working? not really - maybe in 3.8.1?
  • Migrate high priority vtkMy apps with ITK.
  • Migrate high priority vtkMy apps with Qt.
  • itk Reader/Writer for AIM (and remove VTK dependencies for apps that use only this VTK item).
  • Revision number in main page of vtkski doxygen documentation.

Someday

[edit]
  • mighty-mac and mavis: reconfigure disks into a single striped RAID array (hence users don't have to think about using /Volumes/localdata).
  • ParaView: Registration Plugins (a modification of one of http://paraview.org/Wiki/User_Created_Plugins ?)
  • Speed tests for ifdutil and faim in general.

Random Ideas

[edit]
Retrieved from "https://bone.wiki/index.php?title=Eric_To_Do&oldid=5344"