Editing Scanco User Instructions (section)

===Correct Trabecular Contours and Run the Cortical Evaluation===
Once the standard evaluation has been completed, an auto-segmentation process is completed to segment the cortical from the trabecular bone. However, the auto-segmentation is not always accurate, and hence the contour (TRAB.GOBJ) will need to be checked.

#Load TRAB.GOBJ by selecting File, then load GOBJ from the top panel.
#*You will now see a list of all GOBJ files pertaining to your sample. You'll need to load the TRAB.GOBJ.
#*When the TRAB.GOBJ has loaded, you will see that the loaded contour is between the cortical and trabecular bone.
#Correct contours as needed
#*Can manually adjust the slices or use the Range/Morph function. 
#*Remember to draw COUNTER-CLOCKWISE!
#Run the 3D cortical evaluation for your specific project (and timepoint, if relevant). 
#*Select 3D evaluation under Tasks to select the appropriate evaluation script. 


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